microTalk Karl Klose

Antibiotic resistant bacteria are threatening modern society by making antibiotics obsolete. Dr. Nizet is a Professor and Vice Chair in the Department of Pediatrics at UCSD, as well as the faculty lead for the UCSD Collaborative to Halt Antibiotic-Resistant Microbes (CHARM). His laboratory studies how the human immune system interacts with microbial pathogens, with particular focus on antibiotic resistant bacteria and how to treat them.

Dr. Nizet discusses how his training as a physician helps drive the research in his laboratory, how repurposing therapeutic drugs could help fight antimicrobial resistance, how taking advantage of host immune responses can enhance the treatment of infectious diseases, how the success of modern medicine is training some bacteria to become pathogenic, how nanobots made from algae can be used to treat difficult infections, and how the environment at UC San Diego contributed to the success of his lab.

This episode was supported by the do-it-yourself mail-order Gram stain kit.*
Participants: Karl Klose, Ph.D. (UTSA) Victor Nizet, M.D. (UC San Diego) Venus Stanton (UTSA) Jesus Romo, Ph.D. (UTSA) * "Ads" heard on microTalk are for parody purposes only, there are no actual products for sale.

Houston, we definitely do NOT have a problem…with interviewing Dr. Kate Rubins, NASA astronaut.  Dr. Rubins is a virologist who has spent over 300 days in space, performing experiments aboard the International Space Station, where she was the first person to sequence DNA in space.

We caught up with Dr. Rubins at the Neutral Buoyancy Lab in Houston, where she discusses what it felt like the first time she saw the earth from space, some of the difficulties in performing research without gravity, how to study the microbiome of the ISS, how the international inhabitants of the ISS communicate with each other, and the spur-of-the-moment event that led to her becoming an astronaut.

This episode was supported by Cestodium, a new weight-loss program.*
Participants: Karl Klose, Ph.D. (UTSA) Kate Rubins, Ph.D. (NASA) Janakiram Seshu, Ph.D. (UTSA) Jesus Romo, Ph.D. (UTSA) *The recorded ads heard on microTalk are for parody purposes only, there are no actual products for sale.

Dr. Hyun Jung Kim, an Assistant Professor at Cleveland Clinic specializes in coaxing human cultured cells to differentiate and form tissues resembling the gastrointestinal tract, in order to study microbe-GI interactions. 

Dr. Kim discusses his surprising discovery of how common immortalized cultured cells can differentiate and form something that resembles a gut-on-a-chip, how these guts-on-a-chip can be used to study diseases like inflammatory bowel disease and colorectal cancer, how the addition of a microbiome to the gut-on-a-chip allows the bacteria to retain diversity unlike in a test tube, how the gut-on-a-chip could be valuable for personalized medicine, and the things he misses about Texas since moving from there.

This episode was supported by Eezy Breezy Poke, an elegant at-home vaccine service.
Participants: Karl Klose, Ph.D. (UTSA) Hyun Jung Kim, Ph.D. (Cleveland Clinic) Janakiram Seshu, Ph.D. (UTSA) Jesus Romo, Ph.D. (UTSA)

Plague and anthrax are feared diseases due to high mortality rates following pulmonary exposure, and both are considered potential bioweapons. 

Dr. Virginia Miller, professor at the University of North Carolina at Chapel Hill and ASM President, studies plague, as well as other Gram negative bacteria. Dr. Theresa Koehler, emeritus professor at UTHealth Houston and ASM president-elect, is an expert in anthrax. 

microTalk caught up with Dr. Miller and Dr. Koehler at ASM Microbe 2023 in Houston to discuss these biothreat agents.

Dr. Miller discusses why she studies plague, the differences between bubonic and pneumonic plague, why Klebsiella pneumoniae poses a growing health threat, and what it was like being John Mekalanos’ first Ph.D. student.

Dr. Koehler discusses why anthrax is considered a potential bioweapon, why significant scientific progress was made following the anthrax attacks of 2001, why gardeners shouldn’t worry about catching anthrax, and her first failed experiment.  Both discuss their vision for ASM and the role it plays in microbiological research and society.
Participants: Karl Klose, Ph.D. (UTSA) Virginia Miller, Ph.D. (UNC Chapel Hill) Theresa Koehler, Ph.D. (UT Health Houston) Janakiram Seshu, Ph.D. (UTSA) Jesus Romo, Ph.D. (UTSA)

Dr. John Coates, a professor at the University of California Berkeley specializes in environmental microbiology and how microbes can be utilized to resolve problems in industry. 

microTalk caught up with Dr. Coates at the ASMicrobe conference in Houston and discussed his research in applied and environmental microbiology. 

Dr. Coates discusses an unexpected discovery of how microbes drive the iodine cycle on earth, how sequencing microbes in the oceans has been beneficial for identifying novel biochemical activities, how climate change has stimulated his research into the “bioeconomy”, why he’s optimistic that science can mitigate the effects of climate change, and how Berkeley is a remarkable place to do science.

This episode was supported by miniScope, the portable keychain microscope.
Participants: Karl Klose, Ph.D. (UTSA) John Coates, Ph.D. (UCSD) Janakiram Seshu, Ph.D. (UTSA) Jesus Romo, Ph.D. (UTSA)

The study of evolution has experienced a tremendous revolution with the advances in current sequencing technologies enabling e.g. rapid whole genome sequencing. 

Dr. Vaughn Cooper, a professor at the University of Pittsburgh who studies evolution in microbes, has taken advantage of these technologies to delve into how microorganisms adapt and evolve in different environments. microTalk caught up with Dr. Cooper at the ASM Microbe conference in Houston and discussed microbial evolution with him. 

Dr. Cooper discusses the power of next generation sequencing for the study of evolution, how mutation rates affect evolution, how providing hands-on evolution experiments to high school students can stimulate the next generation of scientists, how scientists need to work to combat public distrust of science, how antibiotic resistance evolves in the presence of immunodeficiency, and how his initial experience with baculoviruses hooked him into a lifelong study of evolution.
This episode was supported by Darbie’s pinworm detection kit, to combat nematodes in your bikini bottom.
Participants: Karl Klose, Ph.D. (UTSA) Vaughn Cooper, Ph.D. (University of Pittsburgh) Janakiram Seshu, Ph.D. (UTSA) Jesus Romo, Ph.D. (UTSA)