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Papers Aloud Arkadiy Garber
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This podcasts features readings of open-access (CC BY) primary research articles and reviews relevant to evolutionary and cell biology, environmental and clinical microbiology, symbiosis, geobiology, and bioinformatics.
I avoid Methods sections, and sometimes Results (depending on how amenable it is to reading out loud). Abstract, Introduction, Discussion, and Conclusions are always included.
If you are an author of a research article and would like to have your work converted to an audio format, or send me an audio recording of your paper, please reach out to rkdgarber@gmail.com.
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#44 - History of the ribosome and the origin of translation
Title: History of the ribosome and the origin of translationAuthors: Anton S. Petrova, Burak Gulen, Ashlyn M. Norris, Nicholas A. Kovacs, Chad R. Bernier, Kathryn A. Lanier, George E. Fox, Stephen C. Harvey, Roger M. Wartell, Nicholas V. Hud, and Loren Dean Williams,Citation: Petrov, A. S., Gulen, B., Norris, A. M., Kovacs, N. A., Bernier, C. R., Lanier, K. A., Fox, G. E., Harvey, S. C., Wartell, R. M., Hud, N. V., & Williams, L. D. (2015). History of the ribosome and the origin of translation. Proceedings of the National Academy of Sciences of the United States of America, 112(50), 15396–15401.Link to article
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#44 - Histone-organized chromatin in bacteria - Hocher et al 2023 - BioRxiv
Title: Histone-organized chromatin in bacteria
Authors: Antoine Hocher, Shawn P. Laursen, Paul Radford, Jess Tyson, Carey Lambert, Kathryn M Stevens, Mathieu Picardeau, R. Elizabeth Sockett, Karolin Luger, Tobias Warnecke
Citation: Hocher, A., Laursen, S. P., Radford, P., Tyson, J., Lambert, C., Stevens, K. M., Picardeau, M., Elizabeth Sockett, R., Luger, K., & Warnecke, T. (2023). Histone-organized chromatin in bacteria. In bioRxiv (p. 2023.01.26.525422). https://doi.org/10.1101/2023.01.26.525422
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#44 - A Complete Nuclear Pore Complex in the Last Eukaryotic Common Ancestor - Neumann et al., 2010 - PLON One
Title: Comparative Genomic Evidence for a Complete Nuclear Pore Complex in the Last Eukaryotic Common Ancestor
Authors: Nadja Neumann, Daniel Lundin, Anthony M. Poole
Citation: Neumann, N., Lundin, D., & Poole, A. M. (2010). Comparative genomic evidence for a complete nuclear pore complex in the last eukaryotic common ancestor. PloS One, 5(10), e13241.
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#44 - Origin of the nucleus - Jékely 2008 - Biology Direct
Title: Origin of the nucleus and Ran-dependent transport to safeguard ribosome biogenesis in a chimeric cell
Authors: Gáspár Jékely
Citation: Jékely, G. (2008). Origin of the nucleus and Ran-dependent transport to safeguard ribosome biogenesis in a chimeric cell. Biology Direct, 3, 31.
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#43 - Mutation Spectrum Variation - Jiang et al., 2021 - eLife
Title: A modified fluctuation assay reveals a natural mutator phenotype that drives mutation spectrum variation within Saccharomyces cerevisiae
Authors: Pengyao Jiang, Anja R Ollodart, Vidha Sudhesh, Alan J Herr, Maitreya J Dunham, Kelley Harris
Citation: Jiang, P., Ollodart, A. R., Sudhesh, V., Herr, A. J., Dunham, M. J., & Harris, K. (2021). A modified fluctuation assay reveals a natural mutator phenotype that drives mutation spectrum variation within Saccharomyces cerevisiae. eLife, 10. https://doi.org/10.7554/eLife.68285.
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#42 - Evolution in Energy Limited Microorganisms - Shoemaker et al., 2021 - MBE
Title: Molecular Evolutionary Dynamics of Energy Limited Microorganisms
Authors: William R. Shoemaker, Evgeniya Polezhaeva, Kenzie B. Givens, and Jay T. Lennon
Citation: Shoemaker, W. R., Polezhaeva, E., Givens, K. B., & Lennon, J. T. (2021). Molecular Evolutionary Dynamics of Energy Limited Microorganisms. Molecular Biology and Evolution, 38(10), 4532–4545.
Link to article
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