Transcribed

Benchling

Transcribed explores the human stories behind biotech breakthroughs. Benchling CEO Sajith Wickramasekara sits down with scientists, founders, and R&D leaders to talk candidly about the decisions shaping modern biotech. From career pivots to breakthroughs, setbacks, and lessons in leadership, these are real conversations with the people moving science forward.

Épisodes

  1. Jacob Berlin on why chemistry is the last frontier for AI drug discovery

    13 AVR.

    Jacob Berlin on why chemistry is the last frontier for AI drug discovery

    Jacob Berlin spent years perfecting a microarray chip the size of a fingernail before he thought about starting a company. Now, as cofounder and CEO of Terray Therapeutics, he's using that hardware to generate chemistry data at a scale the industry has never seen, and arguing that models without proprietary data aren't a moat at all. Jacob joined Benchling CEO Sajith Wickramasekara to talk about why small molecules are AI's hardest and most important frontier, where human chemists still matter, and what the agentic future of drug discovery actually looks like. Key Takeaways: ➜ The AI opportunity in small molecules is trickierthan in biologics because chemical space is infinite, and models without disruptive hardware to generate data at scale will keep hitting the same ceiling. ➜ The durable moat isn't the model—it's the intersection of experimentation and AI, with Terray's dataset now 40x larger than the entire public chemistry dataset and growing by a billion measurements every quarter. ➜ Experienced chemists still play a critical role in seeding novel datasets and catching model suggestions that look wrong but turn out to be breakthroughs. Chapters: [00:50] The elevator pitch (and science) that launched a family business [05:09] Why small molecules still demand reinvention [09:25] Building the stack in sequence: Hardware, then data, and AI [20:43] The true moat in AI drug discovery [29:33] Why the platform isn’t the finish line [33:42] Why we’ll always need humans in the loop [39:18] The future of AI drug discovery is agentic — and actually practical [42:15] Lightning round About Jacob: Jacob is the CEO and cofounder of Terray. Terray was formed in 2018 around a new experimental technology that increases the scale while reducing the cost and cycle time for small molecule evaluation, creating massive amounts of highly precise data to fuel advanced computation and AI in the drug discovery process. Jacob and his team developed this breakthrough technology in his lab at the City of Hope, where he was an associate professor. Under Jacob’s visionary and mission driven leadership, Terray has built a world-class team of computation and drug development leaders, built an internal pipeline focused on new treatments for immunology disorders, established partnerships with global pharma partners, and scaled from that initial invention to a highly automated lab that supports the company’s AI and computational drug discovery and development platform. Jacob’s academic work centered on the intersection of nanotechnology and chemistry, and he has been recognized by the industry as an expert in the field, with numerous awards, and more than fifteen thousand citations of his work. Jacob holds 20 patents, a BA in Chemistry from Harvard and was awarded his PhD in organometallic chemistry from Caltech, where he studied with Nobel Laureate Bob Grubbs. Jacob completed his postdoctoral training at MIT and Rice University, focusing on synthetic chemistry and nanotechnology, before founding his lab at City of Hope. Jacob lives with his family in the Los Angeles area. 💡 Learn more about Terray Therapeutics: https://www.terraytx.com/ Guest Highlights: "What fits on our ultra-dense microarray, which is the size of a fingernail, would have previously fit on about half a tennis court." "I call it 'AI abundance.' You get to the end with 10,000 really interesting molecules, and a chemistry team that can make 50. How do you pick? Solving that optimally is really important." "Whatever you pick to start on is actually your business. If you say, 'We're going to start on this target just to show the platform works, and then we'll pick the real things to work on' — it never happens." 🔗 Links: ➜ Connect with Sajith: linkedin.com/in/sajithw ➜ Connect with Jacob: linkedin.com/in/jacob-berlin-phd-57a82

    45 min
  2. Kate Haviland on strategic pivots and turning a phase 3 failure into a blockbuster

    7 AVR.

    Kate Haviland on strategic pivots and turning a phase 3 failure into a blockbuster

    Kate Haviland knows how to push through clinical setbacks and turn breakthrough science into life-changing therapies. As former CEO of Blueprint Medicines, she led the team that took Ayvakit from a failed Phase 3 to a $500M blockbuster — by cutting the dose by 87% and betting on a patient population nobody had treated before. Kate joined Sajith to talk about holding conviction despite ambiguity, earning trust from teams through uncertainty, and the capital allocation discipline that kept Blueprint focused when everything felt like a priority. Key Takeaways: ▸ Blueprint's Phase 3 failure in GI stromal tumors didn't kill Ayvakit. It redirected it. Cutting the dose by 87% opened a patient population nobody had treated before and built a $500M franchise. ▸ Holding conviction through ambiguity requires knowing the difference between reading data honestly and squinting to see what you want. Kate is direct about how hard that line is to walk. ▸ The Sanofi acquisition came down to more than economics. What distinguished the deal was that Sanofi wanted the team, not just the assets. Chapters: [00:55] Turning a phase 3 failure into a blockbuster drug [12:10] Landing a multi-billion dollar acquisition [18:07] Why collaboration is not a zero-sum game [20:36] Why it’s not always about the deal size [23:01] A CEO’s biggest responsibilities [25:44] Building culture of empowerment and empathy [31:11] Risky bets that ultimately paid off [34:18] Advice for the next generation of scientists About Kate: Kate Haviland is a life sciences executive with more than 20 years of leadership in the biopharmaceutical industry, specializing in scaling high-growth organizations, business development, portfolio strategy, investor relations, and commercial execution. She served as President and CEO of Blueprint Medicines from 2022 until its acquisition in July 2025, previously holding roles as Chief Operating Officer and Chief Business Officer, where she helped drive the company’s growth and build key corporate functions. Earlier in her career, she held leadership positions at Idera Pharmaceuticals, Sarepta Therapeutics, PTC Therapeutics, and Genzyme. Kate holds a B.A. from Wesleyan University and an M.B.A. from Harvard Business School and currently serves on several boards, including Fulcrum Therapeutics, Bicara Therapeutics, the Biotechnology Innovation Organization (BIO), and the Boston Museum of Science. Learn more about Blueprint Medicines: blueprintmedicines.com Guest Highlights: “It's a balance between what the data’s telling you and also understanding the limitations of any given dataset.” “If one party walks away feeling that they've gotten everything on their list, that's not going to be a successful beginning for a collaboration.” “You have to believe that being a leader is about setting this context for great people to do their best work.” Links & Resources: ▸ Connect with Sajith: linkedin.com/in/sajithw ▸ Connect with Kate: linkedin.com/in/kate-haviland-720aab3/

    40 min

À propos

Transcribed explores the human stories behind biotech breakthroughs. Benchling CEO Sajith Wickramasekara sits down with scientists, founders, and R&D leaders to talk candidly about the decisions shaping modern biotech. From career pivots to breakthroughs, setbacks, and lessons in leadership, these are real conversations with the people moving science forward.

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