de-CIPHERing Infectious Disease

CIPHER

”de-CIPHERing Infectious Disease” explores the cutting-edge interdisciplinary research happening at UNC Charlotte’s CIPHER Research Center. Each episode features an in-depth interview with one of CIPHER’s researchers, allowing them to discuss their background, current projects, and the exciting team science approach they take to tackle complex issues at the intersection of health, environment, data science, genomics, infectious disease, and more. Host Ian Binns engages the researchers in accessible conversations that dive into the science behind their work while also highlighting the collaborative spirit and diverse expertise that makes CIPHER’s ”One Health” philosophy so powerful. From evolution and phylogenetics to machine learning, drug discovery, and preventing the next pandemic, ”de-CIPHERing Infectious Disease” offers listeners a window into the innovative solutions being pioneered to address global challenges.

  1. 02/10/2025

    Life on the Edge with Laurel Yohe

    Episode 13 What can we learn from animals that live life on the edge? Dr. Laurel Yohe joins the podcast to discuss her fascinating research on bats, creatures with extreme adaptations like supersonic echolocation and mysteriously resilient immune systems. The conversation explores how studying these unique animals, using everything from 100-year-old museum specimens to cutting-edge genomic sequencing, provides critical insights into evolution and the transmission of viruses. Dr. Yohe also makes a powerful case for "science for the sake of discovery," where pure curiosity can lead to the most unexpected and vital breakthroughs.   Find out more at cipher.charlotte.edu. Key Takeaways Studying animals that live at biological extremes, such as in unique environments or with unusual metabolisms, provides a powerful window into the evolutionary pressures that create diversity. Modern research often finds success by creatively blending old and new scientific methods. For instance, basic tissue staining of a bat specimen from 1906 yielded images as clear as if the sample were fresh, showing the value of classic techniques. To optimize their "supersonic" echolocation abilities, the anatomy of horseshoe bats has been completely rearranged. Their throats have essentially moved up into their faces to fine-tune how they perceive the world through sound. Evolutionary adaptations for one purpose can have unintended consequences for other systems. The same changes that improved bat echolocation also altered the placement of immune cells in the nasal cavity, potentially affecting how they tolerate viruses. The risk of pathogens spreading from animals to humans increases as we encroach on wildlife habitats. This creates a greater interface between wild animals, domesticated animals, and people, raising the chances of a spillover event. Research driven by pure curiosity is essential because it can become unexpectedly vital. Foundational knowledge on bat noses, gathered simply out of scientific interest, suddenly became highly relevant during the COVID-19 pandemic.   This podcast was produced and edited by Zack Jackson CIPHER is a proud part of UNC Charlotte who holds all rights to the content created by this podcast

    57 min
  2. 16/12/2024

    Evolutionary Informatics with Dr. Alex Dornburg

    Episode 10 Join us for an engaging conversation with Dr. Alex Dornburg, Assistant Professor in Bioinformatics and Genomics, as he shares his journey from childhood passion for wildlife photography to groundbreaking research in evolutionary informatics. We explore the fascinating world of Antarctic fishes, the cutting-edge applications of generative AI in education, and the critical role of team science in solving complex problems. Whether you're curious about marine biology, AI, or the intersection of diverse scientific disciplines, this episode offers a unique perspective on discovery, resilience, and innovation. Find out more at cipher.charlotte.edu.   Key Takeaways Passion Leads to Discovery: Alex Dornburg's love for photographing animals as a child sparked his lifelong interest in science, eventually leading to a career in evolutionary informatics. Evolutionary Informatics: Alex's work focuses on using bioinformatics and evolutionary biology to address contemporary problems, such as forecasting biodiversity changes and understanding emergent diseases. Antarctic Fish Research: Alex studies unique Antarctic fish that lack hemoglobin and have adapted to extreme environments, using genetic traits that, in humans, would cause severe conditions like brittle bone disease. Adapting During the Pandemic: The COVID-19 pandemic shifted Alex’s focus from fieldwork to computational research, highlighting the flexibility needed in science to adapt to unforeseen circumstances. AI in Education: Alex uses generative AI in his teaching to help students explore bioinformatics tasks, making science education more engaging, individualized, and relevant to their interests. Team Science: Alex emphasizes the value of interdisciplinary collaboration, integrating diverse perspectives and expertise to tackle complex problems in biology and beyond. Revolutionizing Public Health: By applying evolutionary biology, Alex's team modeled antibody waning and reinfection risks for COVID-19, providing actionable insights during the pandemic and shaping future responses. Environmental DNA (eDNA): His lab uses eDNA technology to map biodiversity in marine environments, offering a non-invasive way to track species presence and ecological changes. Science Is a Journey of Learning: Alex believes science is a continuous conversation that demands curiosity, persistence, and the willingness to embrace failure as part of the process. Personal and Professional Legacy: Alex aspires to mentor successful, fulfilled students, contribute meaningfully to science, and maintain a lifelong love for learning and exploration, including his personal goal of becoming a polyglot. This podcast was produced and edited by Zack Jackson CIPHER is a proud part of UNC Charlotte who holds all rights to the content created by this podcast

    59 min
  3. 13/08/2024

    Ticks and their Tricks with Dr. Rafael Viera

    Episode 9 In the final episode of Season 1, we dive into the fascinating world of ticks, pathogens, and global health with Dr. Rafael Vieira, a self-proclaimed "pathogen hunter" from UNC Charlotte. From the depths of the Amazon to the labs of North Carolina, Dr. Vieira takes us on a thrilling journey through his groundbreaking research on vector-borne diseases. Discover why your next eco-tourism adventure might be riskier than you think, and how climate change is reshaping the landscape of infectious diseases. Dr. Vieira shares hair-raising tales of tick collection, the excitement of discovering new bacteria, and his mission to bridge health gaps in sub-Saharan Africa. This episode is a gripping exploration of the intricate dance between humans, animals, and our environment – and why understanding this connection might just save us from the next pandemic. Find out more at cipher.charlotte.edu.   Key Takeaways There's more to tick-borne illnesses than just Lyme disease. Dr. Vieira's research has uncovered several new bacteria and pathogens, highlighting the need for broader awareness and research. Activities like eco-tourism, illegal animal trafficking, and deforestation can have far-reaching consequences on the spread of vector-borne diseases across continents. Climate change is altering the distribution patterns of ticks and other disease vectors, potentially exposing new populations to these threats. Dr. Vieira's work in sub-Saharan Africa underscores the value of international partnerships in addressing global health issues and nurturing the next generation of scientists in developing countries. By studying emerging pathogens and disease patterns, Dr. Vieira and his colleagues are working to stay ahead of potential outbreaks, potentially preventing future epidemics or pandemics. This podcast was produced and edited by Zack Jackson CIPHER is a proud part of UNC Charlotte who holds all rights to the content created by this podcast

    46 min
  4. 30/07/2024

    Unraveling the Virosphere with Dr. Richard Allen White III

    Episode 8 Join us for an enlightening conversation with Dr. Richard Allen White III, a pioneering computational and molecular virologist at the University of North Carolina at Charlotte. Inspired by a 90's movie and captivated by the world of viruses, Dr. White takes us on a journey through his unique career path, from the first class that hooked him to his current groundbreaking research. In this episode, Dr. White discusses the fascinating realm of virology, shedding light on the unseen universe of viruses that inhabit our world. We delve into the critical role viruses play in our ecosystems, their impact on human health, and the cutting-edge field of phage therapy—a potential game-changer in the fight against antibiotic-resistant bacteria. Whether you're a science enthusiast or simply curious about the microscopic entities that shape our lives, this episode promises to be an engaging and informative listen. Don't miss out on Dr. White's expert insights and captivating stories from the front lines of virology. Find out more at cipher.charlotte.edu.   Key Takeaways Viruses are abundant and play a crucial role in ecosystems, impacting human health and the environment. Phage therapy, the use of viruses to treat bacterial infections, shows promise in combating antibiotic-resistant bacteria. Computational biology, including AI, is revolutionizing the study of viruses and their interactions. Studying microbial mats, such as those found in the NASA CSA project Mars Life, provides insights into the evolution of ecosystems and the potential for bioconcrete production. Keystone species play a crucial role in maintaining biodiversity and the health of ecosystems. Mentorship and teaching entrepreneurial skills are important for students' success and future career paths. This podcast was produced and edited by Zack Jackson CIPHER is a proud part of UNC Charlotte who holds all rights to the content created by this podcast

    55 min
  5. 16/07/2024

    Infoveillance with Dr. Shi Chen

    Episode 7 In this episode, we chat with Dr. Shi Chen, a renowned expert in infectious diseases and health informatics. Dr. Chen shares his fascinating journey from catching bugs in the countryside to tackling global health crises. We dive into his research on big data analytics, epidemic modeling, and the spread of misinformation during the COVID-19 pandemic. Discover how public health communication can improve and the surprising similarities between the spread of diseases and digital misinformation. Tune in for an insightful discussion on the future of health informatics and combating misinformation.   Find out more at cipher.charlotte.edu.   Key Takeaways Shi Chen's interest in science began with his fascination with animals and bugs as a child. He later focused on infectious disease modeling and research in big data analytics, health informatics, and mathematical modeling. Infoveillance is a surveillance method that monitors public opinions and sentiments on the internet to detect potential outbreaks and misinformation. Effective health communication is crucial in addressing public health concerns, and the impact of misinformation on vaccination rates for diseases like COVID-19 and MMR is a lasting concern. The scenario modeling hub is a collaborative effort to standardize data and assumptions for modeling the COVID-19 pandemic. Artificial intelligence has automated data collection and analysis in epidemiology and allows for the integration of high-dimensional datasets. Dealing with social and political aspects of disease outbreaks, such as misinformation and discrimination, is a challenge. Epidemiologists use data mapping to understand spatial and temporal heterogeneities and inform public health decisions.   This podcast was produced and edited by Zack Jackson CIPHER is a proud part of UNC Charlotte who holds all rights to the content created by this podcast

    55 min

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”de-CIPHERing Infectious Disease” explores the cutting-edge interdisciplinary research happening at UNC Charlotte’s CIPHER Research Center. Each episode features an in-depth interview with one of CIPHER’s researchers, allowing them to discuss their background, current projects, and the exciting team science approach they take to tackle complex issues at the intersection of health, environment, data science, genomics, infectious disease, and more. Host Ian Binns engages the researchers in accessible conversations that dive into the science behind their work while also highlighting the collaborative spirit and diverse expertise that makes CIPHER’s ”One Health” philosophy so powerful. From evolution and phylogenetics to machine learning, drug discovery, and preventing the next pandemic, ”de-CIPHERing Infectious Disease” offers listeners a window into the innovative solutions being pioneered to address global challenges.