Papers Aloud

Arkadiy Garber
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This podcasts features readings of open-access (CC BY) primary research articles and reviews relevant to evolutionary and cell biology, environmental and clinical microbiology, symbiosis, geobiology, and bioinformatics. I avoid Methods sections, and sometimes Results (depending on how amenable it is to reading out loud). Abstract, Introduction, Discussion, and Conclusions are always included. If you are an author of a research article and would like to have your work converted to an audio format, or send me an audio recording of your paper, please reach out to rkdgarber@gmail.com.

  1. #44 - History of the ribosome and the origin of translation

    04/11/2023

    #44 - History of the ribosome and the origin of translation

    Title: History of the ribosome and the origin of translationAuthors: Anton S. Petrova, Burak Gulen, Ashlyn M. Norris, Nicholas A. Kovacs, Chad R. Bernier, Kathryn A. Lanier, George E. Fox, Stephen C. Harvey, Roger M. Wartell, Nicholas V. Hud, and Loren Dean Williams,Citation: Petrov, A. S., Gulen, B., Norris, A. M., Kovacs, N. A., Bernier, C. R., Lanier, K. A., Fox, G. E., Harvey, S. C., Wartell, R. M., Hud, N. V., & Williams, L. D. (2015). History of the ribosome and the origin of translation. Proceedings of the National Academy of Sciences of the United States of America, 112(50), 15396–15401.Link to article

    10 min

  2. 02/22/2023

    #44 - Histone-organized chromatin in bacteria - Hocher et al 2023 - BioRxiv

    Title: Histone-organized chromatin in bacteria Authors: Antoine Hocher, Shawn P. Laursen, Paul Radford, Jess Tyson, Carey Lambert, Kathryn M Stevens, Mathieu Picardeau, R. Elizabeth Sockett, Karolin Luger, Tobias Warnecke Citation: Hocher, A., Laursen, S. P., Radford, P., Tyson, J., Lambert, C., Stevens, K. M., Picardeau, M., Elizabeth Sockett, R., Luger, K., & Warnecke, T. (2023). Histone-organized chromatin in bacteria. In bioRxiv (p. 2023.01.26.525422). https://doi.org/10.1101/2023.01.26.525422 Link to paper

    11 min
  3. #44 - A Complete Nuclear Pore Complex in the Last Eukaryotic Common Ancestor - Neumann et al., 2010 - PLON One

    02/15/2023

    #44 - A Complete Nuclear Pore Complex in the Last Eukaryotic Common Ancestor - Neumann et al., 2010 - PLON One

    Title: Comparative Genomic Evidence for a Complete Nuclear Pore Complex in the Last Eukaryotic Common Ancestor Authors: Nadja Neumann, Daniel Lundin, Anthony M. Poole Citation: Neumann, N., Lundin, D., & Poole, A. M. (2010). Comparative genomic evidence for a complete nuclear pore complex in the last eukaryotic common ancestor. PloS One, 5(10), e13241. Link to paper

    35 min
  4. #44 - Origin of the nucleus - Jékely 2008 - Biology Direct

    02/08/2023

    #44 - Origin of the nucleus - Jékely 2008 - Biology Direct

    Title: Origin of the nucleus and Ran-dependent transport to safeguard ribosome biogenesis in a chimeric cell Authors: Gáspár Jékely Citation: Jékely, G. (2008). Origin of the nucleus and Ran-dependent transport to safeguard ribosome biogenesis in a chimeric cell. Biology Direct, 3, 31. Link to article

    27 min
  5. #43 - Mutation Spectrum Variation - Jiang et al., 2021 - eLife

    02/06/2023

    #43 - Mutation Spectrum Variation - Jiang et al., 2021 - eLife

    Title: A modified fluctuation assay reveals a natural mutator phenotype that drives mutation spectrum variation within Saccharomyces cerevisiae Authors: Pengyao Jiang, Anja R Ollodart, Vidha Sudhesh, Alan J Herr, Maitreya J Dunham, Kelley Harris Citation: Jiang, P., Ollodart, A. R., Sudhesh, V., Herr, A. J., Dunham, M. J., & Harris, K. (2021). A modified fluctuation assay reveals a natural mutator phenotype that drives mutation spectrum variation within Saccharomyces cerevisiae. eLife, 10. https://doi.org/10.7554/eLife.68285. Link to article

    27 min
  6. #42 - Evolution in Energy Limited Microorganisms - Shoemaker et al., 2021 - MBE

    02/03/2023

    #42 - Evolution in Energy Limited Microorganisms - Shoemaker et al., 2021 - MBE

    Title: Molecular Evolutionary Dynamics of Energy Limited Microorganisms Authors: William R. Shoemaker, Evgeniya Polezhaeva, Kenzie B. Givens, and Jay T. Lennon Citation: Shoemaker, W. R., Polezhaeva, E., Givens, K. B., & Lennon, J. T. (2021). Molecular Evolutionary Dynamics of Energy Limited Microorganisms. Molecular Biology and Evolution, 38(10), 4532–4545. Link to article

    12 min
  7. #41 - Diversity of Shine-Dalgarno Sequences - Wen et al., 2021 - RNA Biology

    01/26/2023

    #41 - Diversity of Shine-Dalgarno Sequences - Wen et al., 2021 - RNA Biology

    Title: The diversity of Shine-Dalgarno sequences sheds light on the evolution of translation initiation Authors: Jin-Der Wen, Syue-Ting Kuo, and Hsin-Hung David Chou. Citation: Wen, J.-D., Kuo, S.-T., & Chou, H.-H. D. (2021). The diversity of Shine-Dalgarno sequences sheds light on the evolution of translation initiation. RNA Biology, 18(11), 1489–1500. Link to article

    48 min
  8. #40 - Incipient genome erosion and metabolic streamlining for antibiotic production in a defensive symbiont - Nechitaylo et al., 2022 - PNAS

    09/23/2022

    #40 - Incipient genome erosion and metabolic streamlining for antibiotic production in a defensive symbiont - Nechitaylo et al., 2022 - PNAS

    Title: Incipient genome erosion and metabolic streamlining for antibiotic production in a defensive symbiont Authors: Taras Y. Nechitaylo, Mario Sandoval-Calderónb\, Tobias Engl, Natalie Wielsch, Diane M. Dunne, Alexander Goesmann, Erhard Strohm, Aleš Svatoš, Colin Dale, Robert B. Weiss, and Martin Kaltenpoth Citation: Nechitaylo, T. Y., Sandoval-Calderón, M., Engl, T., Wielsch, N., Dunn, D. M., Goesmann, A., Strohm, E., Svatoš, A., Dale, C., Weiss, R. B., & Kaltenpoth, M. (2021). Incipient genome erosion and metabolic streamlining for antibiotic production in a defensive symbiont. Proceedings of the National Academy of Sciences of the United States of America, 118(17). https://doi.org/10.1073/pnas.2023047118 Link to article defensive symbiosis|protective mutualism|genome erosion|pseudogenization|Streptomyces

    34 min
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About

This podcasts features readings of open-access (CC BY) primary research articles and reviews relevant to evolutionary and cell biology, environmental and clinical microbiology, symbiosis, geobiology, and bioinformatics. I avoid Methods sections, and sometimes Results (depending on how amenable it is to reading out loud). Abstract, Introduction, Discussion, and Conclusions are always included. If you are an author of a research article and would like to have your work converted to an audio format, or send me an audio recording of your paper, please reach out to rkdgarber@gmail.com.

Information

  • Creator
    Arkadiy Garber
  • Years Active
    2021 - 2023
  • Episodes
    47
  • Rating
    Clean
  • Copyright
    © Arkadiy Garber 2021
  • Show Website
    Papers Aloud